*shrug* I got nothing really, wish I could be more helpful. The times that I've taken my cats in for URI's, they get a jab, are sick for 24-48hrs, and then are good after that. The fact that it lingers would cause me some concern, as would the fact that he may have been sick prior to even taking him home. Dunno, hopefully your vet can help you sort this out. I would definitely take it seriously though.
[edit] One thing that just occurred to me...maybe the stomach upset is for some reason other than the URI. Perhaps trying an experiment like instead of a normal meal, just give him some cooked chicken, and see what effect that has on his stomach. That might give some insight into that part of his ailment anyway. Good luck, let us know how this progresses...
_________________ The little monsters 3
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